GST Return Filing Process: GSTR-1 and GSTR-3B Explained
📞 +91 8075 400 500 · learn@cokonet.com Contact us
● GST and taxation

GST return filing process: GSTR-1 and GSTR-3B explained step by step.

The GST return filing process is the routine every accounts executive in Kerala handles each month: report your sales in GSTR-1, then summarise tax, claim input tax credit and pay in GSTR-3B. Done right, it takes an afternoon. Done wrong, it brings interest, late fees and notices. This guide explains both returns step by step on the GST portal, the due dates for monthly and quarterly filers, how GSTR-2B decides your input tax credit, and the errors that trip up freshers.

Cokonet Academy 12 November 202610 min read
GST return filing process banner with a tax assistant filing returns on a laptop beside stacked invoices

What is the difference between GSTR-1 and GSTR-3B?

GSTR-1 is the statement of outward supplies: invoice-level details of your sales, credit notes and exports. GSTR-3B is the summary return where you declare total tax liability, claim input tax credit and pay the net tax. Monthly filers file GSTR-1 by the 11th and GSTR-3B by the 20th of the next month; quarterly (QRMP) filers have later dates.

Who files GSTR-1 and GSTR-3B

Want to file returns confidently on real data? The Finance Executive Programme at Cokonet Academy covers GST returns, e-invoicing, e-way bills and Tally Prime with GST.

Quick answer: Every regular GST taxpayer files GSTR-1 and GSTR-3B. Composition taxpayers file CMP-08 and GSTR-4 instead. Businesses with turnover up to Rs 5 crore can choose the quarterly QRMP scheme with monthly tax payment.

In practice, the accounts executive prepares the data from Tally Prime or Zoho Books, the senior accountant or consultant reviews it, and the return is filed on the GST portal with an EVC (OTP) or a digital signature certificate.

GST return due dates

Quick answer: Monthly filers: GSTR-1 by the 11th and GSTR-3B by the 20th of the following month. QRMP filers: GSTR-1 by the 13th after the quarter (with optional IFF for the first two months), and GSTR-3B by the 22nd or 24th after the quarter depending on the state; Kerala falls in the 22nd group.

ReturnMonthly filerQRMP filer
GSTR-111th of next month13th of month after the quarter; IFF by the 13th for months 1 and 2 (optional)
GSTR-2BGenerated on the 14th (auto-drafted)Generated monthly
GSTR-3B20th of next month22nd or 24th after the quarter; tax paid monthly through PMT-06 by the 25th

Due dates can be extended by notification, so check the GST portal each month.

How to file GSTR-1 step by step

Quick answer: Log in, open the Returns Dashboard, choose the period, prepare online or upload from the offline tool, fill the B2B, B2C, credit note, export, HSN and document tables, generate the summary, submit and file with EVC or DSC.

  1. Log in at gst.gov.in and go to Services > Returns > Returns Dashboard.
  2. Select the financial year and return period, then Prepare Online under GSTR-1.
  3. Fill Table 4A for B2B invoices with the buyer's GSTIN, so the buyer can claim credit.
  4. Add large inter-state B2C invoices in Table 5 and other B2C sales, summarised by rate and state, in Table 7.
  5. Report credit and debit notes in Table 9B and exports in Table 6A.
  6. Complete the HSN summary in Table 12 and the documents issued in Table 13.
  7. Click Generate GSTR-1 Summary, preview, then Submit and File with EVC or DSC.

E-invoices reported through the IRP flow into GSTR-1 automatically, which reduces manual entry for larger businesses.

How to file GSTR-3B step by step

Quick answer: Check the auto-filled liability from GSTR-1, match input tax credit against GSTR-2B, fill exempt and reverse charge supplies, offset tax using ITC, pay any balance in cash, and file.

  1. Open GSTR-3B for the period on the Returns Dashboard.
  2. Review Table 3.1 (outward supplies). It is auto-populated from GSTR-1; GSTN has moved to lock this auto-filled liability, so corrections are made through GSTR-1A before filing GSTR-3B.
  3. Fill Table 4 (eligible ITC) from GSTR-2B, reversing ineligible credits.
  4. Report exempt, nil-rated and non-GST supplies in Table 5.
  5. Click Proceed to Payment, set off liability using IGST, CGST and SGST credit in the legal order, and pay any balance through a challan.
  6. File with EVC or DSC and download the filed return.

Input tax credit and GSTR-2B

Quick answer: You can claim input tax credit only when you have a valid invoice, the goods or services are received, the supplier has reported the invoice so it appears in your GSTR-2B, and you pay the supplier within 180 days.

Each month, download GSTR-2B and reconcile it with your purchase register in Excel or Tally. Follow up with suppliers whose invoices are missing. Claiming credit that is not in GSTR-2B is the most common reason for notices. Our guide to bank reconciliation statements uses the same matching logic. Excel skills make this much faster; see our pivot tables guide.

Late fees, interest and common errors

Quick answer: Late fee is Rs 50 a day (Rs 20 for nil returns) per return, subject to a cap, and interest of 18 percent a year applies on tax paid late. Returns more than three years past the due date can no longer be filed, so never let a period lapse.

  • Wrong buyer GSTIN in GSTR-1, which denies your customer's credit
  • B2B invoices reported as B2C
  • Claiming ITC not shown in GSTR-2B
  • Mismatch between GSTR-1 and GSTR-3B liability
  • Wrong place of supply, mixing IGST with CGST and SGST
  • Missing HSN summary or documents issued table

You can browse every programme we run on the all courses page or start at the Cokonet Academy homepage. Want to practise filing on sample data with a trainer? Book a free consultation or call +91 8075 400 500.

GST skills and jobs in Kerala

Quick answer: GST return filing is a core skill for accounts executives, GST assistants and tax practitioners. Firms in Kochi, Trivandrum and Thrissur prefer freshers who can prepare GSTR-1 data, reconcile GSTR-2B and draft GSTR-3B.

Pair GST with Tally Prime and Excel and you cover most entry-level accounts roles. Our guide to the accounts executive job covers duties and salary.

Why Cokonet Academy for GST and accounting training

Cokonet Academy is an NSDC partner training institute with campuses in Trivandrum and Kochi. Find us on Google: Cokonet Academy, Trivandrum and Cokonet Academy, Kochi.

  • NSDC partner training institute with campuses in Trivandrum and Kochi, plus a Bengaluru centre and online-live batches
  • 11,200+ successful placements and 50+ corporate hiring partners
  • Expert trainers in SAP (FICO, MM, ABAP), AWS, Python with AI, Data Analytics and Power BI
  • Placement support until you are hired, with mock interviews and resume reviews

The Finance Executive Programme connects accounting theory with the tools finance offices use every day: Tally Prime, Excel, Zoho Books, GST returns and UAE VAT, finished with a capstone project.

Course details

  • Course: Finance Executive Programme, Cokonet Academy
  • Duration: 160 hours over 4 months, in 2-hour sessions
  • Mode: classroom in Trivandrum and Kochi, or online-live; English with Malayalam support
  • Six modules: Accounting Fundamentals (40 hours), Tally Prime with GST (50), GST, Taxation, ESI and EPF through SLP (15), Microsoft Excel (20), UAE VAT (15) and Zoho Books (20), plus a final capstone project
  • Certificates: three certifications (Tally, Excel and the Statutory Literacy Programme) and three Cokonet completion certificates (Accounting Fundamentals, UAE VAT and Zoho Books)
  • Placement: mock interviews, resume support and placement assistance; roles are pathways, not a guarantee

Syllabus, batch dates and trainer profile: Finance Executive Programme in Kerala.

Visit our training centres

Book a free consultation and sit in on a live session before you decide. We are open Monday to Saturday, 9:30am to 10:00pm.

Enrol now

Learn GST returns, Tally Prime and Excel on live projects. See the course and next batch, visit Cokonet Academy, or call and WhatsApp +91 8075 400 500.

Talk to a Cokonet counsellor - free, honest, and if we're not the fit, we'll say so.

Frequently asked questions

What is GSTR-1?

The monthly or quarterly statement of outward supplies with invoice-level details of sales, credit notes and exports.

What is GSTR-3B?

A summary return where you declare tax liability, claim input tax credit and pay net GST.

What is the due date for GSTR-1?

The 11th of the next month for monthly filers and the 13th of the month after the quarter for QRMP filers.

What is the due date for GSTR-3B?

The 20th of the next month for monthly filers; for QRMP filers in Kerala, the 22nd of the month after the quarter.

What is GSTR-2B?

An auto-drafted, monthly statement of input tax credit available to you, based on suppliers' filed returns.

What is the late fee for GST returns?

Rs 50 a day per return (Rs 20 for nil returns), subject to a cap, plus 18 percent annual interest on late tax.

Can I file GSTR-3B before GSTR-1?

You can, but filing GSTR-1 first lets GSTR-3B auto-populate liability correctly, which is the normal practice.

What is the QRMP scheme?

A scheme for taxpayers with turnover up to Rs 5 crore to file returns quarterly while paying tax monthly.

How do I correct a mistake in GSTR-1?

Use GSTR-1A before filing GSTR-3B for the same period, or amend in a later GSTR-1.

Where can I learn GST return filing in Kerala?

Cokonet Academy's Finance Executive Programme in Trivandrum, Kochi and online-live covers GST returns, e-invoicing, Tally Prime and Excel.

Keep reading